Gene detail information of Glyur000735s00021573.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03760.1 | 0 | Nucleotide-diphospho-sugar transferases superfamily protein |
| NR | XP_004496174.1 | 0 | PREDICTED: glucomannan 4-beta-mannosyltransferase 9-like [Cicer arietinum] |
| COG | YP_003391376.1 | 2.00E-61 | family 2 glycosyl transferase [Spirosoma linguale DSM 74] |
| Swissprot | tr|Q9LZR3|CSLA9_ARATH | 0 | Glucomannan 4-beta-mannosyltransferase 9 |
| trEMBL | tr|I1NHP1|I1NHP1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G32990.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00735 | 58879 | 62476 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000735s00021573.1 | PF13641.1 | Glyco_tranf_2_3 | 94 | 321 | 7.20E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.430 |
| SRR1783600 | control | 0.375 |
| SRR1783602 | moderate drought stress | 0.709 |
| SRR1811619 | moderate drought stress | 0.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.789 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.668 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.371 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.430 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.817 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.869 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.623 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.664 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.312 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.331 |
| SRR2967015 | Control (Tissue:root) | 0.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.013 |
| SRR9715740 | Leave | 0.069 |
| SRR9715741 | Leave | 0.210 |
| SRR9715739 | Root | 0.063 |
| SRR9715742 | Root | 0.669 |
| SRR9715743 | Root | 0.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.464 |
| SRR8749028 | MeJA induced 9h | 0.555 |
| SRR8749029 | MeJA induced 9h | 0.627 |
| SRR8749030 | Uninduced | 0.496 |
| SRR8749031 | Uninduced | 0.574 |
| SRR8749032 | Uninduced | 3.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.694 |
| SRR8400027 | Control-Root | 1.202 |