Gene detail information of Glyur000735s00021576.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G10550.10Myotubularin-like phosphatases II superfamily
NRXP_007143837.10hypothetical protein PHAVU_007G105800g [Phaseolus vulgaris]
Swissprottr|F4J3T8|MYTM1_ARATH0Phosphatidylinositol-3-phosphatase myotubularin-1
trEMBLtr|V7BH90|V7BH90_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW15831.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007357861990059-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K18081MTMR1_2 EC:3.1.3.64 3.1.3.95 Inositol phosphate metabolism map00562
Phosphatidylinositol signaling systemmap04070


Gene Ontology

biological_process

GO:0016311  dephosphorylation


molecular_function

GO:0004725  protein tyrosine phosphatase activity

GO:0016791  phosphatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000735s00021576.1PF06602.9Myotub-related2276501.90E-132


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.419
SRR1783600control4.342
SRR1783602moderate drought stress6.191
SRR1811619moderate drought stress6.340

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.385
DRR006520Root Summer glycyrrhizin high producing strain6.464
DRR006521Root Winter glycyrrhizin high producing strain8.262
DRR006522Root Winter glycyrrhizin high producing strain7.915
DRR006523Root Summer glycyrrhizin low producing strain6.852
DRR006524Root Summer glycyrrhizin low producing strain7.074
DRR006525Leaf Summer glycyrrhizin high producing strain9.013
DRR006526Leaf Summer glycyrrhizin high producing strain8.771

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.417
SRR2868004Drought Stress(Tissue:root)15.510
SRR2967015Control (Tissue:root)15.411

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.450
SRR9715740Leave11.070
SRR9715741Leave12.897
SRR9715739Root1.538
SRR9715742Root4.591
SRR9715743Root3.712

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.327
SRR8749028MeJA induced 9h7.690
SRR8749029MeJA induced 9h3.788
SRR8749030Uninduced5.448
SRR8749031Uninduced3.432
SRR8749032Uninduced3.539

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.672
SRR8400027Control-Root10.104

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved