Gene detail information of Glyur000735s00021580.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G52200.10Dihydrolipoamide acetyltransferase, long form protein
NRXP_003556288.10PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial-like isoform X1 [Glycine max]
COGYP_003715853.11.00E-93Dihydrolipoamide acetyltransferase component (E2) of pyruvatedehydrogenase complex [Croceibacter atlanticus HTCC2559]
Swissprottr|Q0WQF7|ODP21_ARATH0Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial (Precursor)
trEMBLtr|I1NHP9|I1NHP9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G33080.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00735110042119060-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00627DLAT, aceF, pdhC EC:2.3.1.12 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016746  transferase activity, transferring acyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000735s00021580.2PF00364.17Biotin_lipoyl781491.50E-20
Glyur000735s00021580.2PF00364.17Biotin_lipoyl2042753.90E-19
Glyur000735s00021580.2PF02817.12E3_binding3203534.10E-07
Glyur000735s00021580.2PF00198.182-oxoacid_dh4316178.20E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control39.227
SRR1783600control39.326
SRR1783602moderate drought stress25.117
SRR1811619moderate drought stress25.115

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.688
DRR006520Root Summer glycyrrhizin high producing strain26.499
DRR006521Root Winter glycyrrhizin high producing strain27.579
DRR006522Root Winter glycyrrhizin high producing strain27.466
DRR006523Root Summer glycyrrhizin low producing strain25.443
DRR006524Root Summer glycyrrhizin low producing strain24.912
DRR006525Leaf Summer glycyrrhizin high producing strain18.251
DRR006526Leaf Summer glycyrrhizin high producing strain18.233

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)67.824
SRR2868004Drought Stress(Tissue:root)54.922
SRR2967015Control (Tissue:root)47.740

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.735
SRR9715740Leave20.841
SRR9715741Leave28.369
SRR9715739Root4.282
SRR9715742Root22.114
SRR9715743Root18.559

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h43.252
SRR8749028MeJA induced 9h45.282
SRR8749029MeJA induced 9h35.964
SRR8749030Uninduced55.458
SRR8749031Uninduced61.266
SRR8749032Uninduced32.831

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root50.600
SRR8400027Control-Root50.845

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved