Gene detail information of Glyur000737s00020109.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G50320.10radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein
NRXP_004501825.10PREDICTED: elongator complex protein 3-like [Cicer arietinum]
COGYP_003483456.15.00E-157histone acetyltransferase, ELP3 family [Aciduliprofundum boonei T469]
Swissprottr|Q93ZR1|ELP3_ARATH0Elongator complex protein 3
trEMBLtr|I1JXG5|I1JXG5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G36790.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0073737137819-


Gene family

Gene familysubfamily
Transcription Factors FamilyGNAT


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003824  catalytic activity

GO:0008080  N-acetyltransferase activity

GO:0051536  iron-sulfur cluster binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000737s00020109.1PF04055.16Radical_SAM1153103.30E-15
Glyur000737s00020109.1PF00583.19Acetyltransf_14595524.70E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.420
SRR1783600control15.454
SRR1783602moderate drought stress29.700
SRR1811619moderate drought stress29.530

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain32.989
DRR006520Root Summer glycyrrhizin high producing strain32.919
DRR006521Root Winter glycyrrhizin high producing strain38.613
DRR006522Root Winter glycyrrhizin high producing strain37.346
DRR006523Root Summer glycyrrhizin low producing strain28.299
DRR006524Root Summer glycyrrhizin low producing strain28.786
DRR006525Leaf Summer glycyrrhizin high producing strain9.760
DRR006526Leaf Summer glycyrrhizin high producing strain9.901

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.979
SRR2868004Drought Stress(Tissue:root)30.333
SRR2967015Control (Tissue:root)34.917

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.799
SRR9715740Leave19.276
SRR9715741Leave21.665
SRR9715739Root32.706
SRR9715742Root38.947
SRR9715743Root38.673

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.573
SRR8749028MeJA induced 9h26.643
SRR8749029MeJA induced 9h16.501
SRR8749030Uninduced16.055
SRR8749031Uninduced8.526
SRR8749032Uninduced11.529

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.902
SRR8400027Control-Root31.909

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved