Gene detail information of Glyur000737s00020111.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G48480.14.00E-57Cysteine proteinases superfamily protein
NRXP_004501822.16.57E-139PREDICTED: probable ubiquitin-like-specific protease 2A-like [Cicer arietinum]
Swissprottr|Q0WKV8|ULP2A_ARATH3.00E-15Probable ubiquitin-like-specific protease 2A
trEMBLtr|I3SBV8|I3SBV8_LOTJA2.00E-136Uncharacterized protein {ECO:0000313|EMBL:AFK37750.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007372152123731-


Gene family

Gene familysubfamily
Ubiquitin FamilyULP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006508  proteolysis


molecular_function

GO:0008234  cysteine-type peptidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000737s00020111.2PF02902.14Peptidase_C48932726.40E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.282
SRR1783600control2.157
SRR1783602moderate drought stress2.246
SRR1811619moderate drought stress2.288

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.090
DRR006520Root Summer glycyrrhizin high producing strain4.142
DRR006521Root Winter glycyrrhizin high producing strain1.175
DRR006522Root Winter glycyrrhizin high producing strain1.227
DRR006523Root Summer glycyrrhizin low producing strain3.153
DRR006524Root Summer glycyrrhizin low producing strain3.011
DRR006525Leaf Summer glycyrrhizin high producing strain2.167
DRR006526Leaf Summer glycyrrhizin high producing strain2.178

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.344
SRR2868004Drought Stress(Tissue:root)6.459
SRR2967015Control (Tissue:root)4.657

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.267
SRR9715740Leave2.202
SRR9715741Leave2.711
SRR9715739Root0.546
SRR9715742Root1.265
SRR9715743Root0.636

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.436
SRR8749028MeJA induced 9h2.900
SRR8749029MeJA induced 9h1.448
SRR8749030Uninduced2.755
SRR8749031Uninduced1.221
SRR8749032Uninduced0.863

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.684
SRR8400027Control-Root7.841

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved