Gene detail information of Glyur000737s00020113.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G13440.11.00E-133glyceraldehyde-3-phosphate dehydrogenase C2
NRAFK45399.10unknown [Lotus japonicus]
COGYP_004042509.11.00E-131glyceraldehyde-3-phosphate dehydrogenase [Paludibacter propionicigenes WB4]
Swissprottr|P34922|G3PC_PEA3.00E-179Glyceraldehyde-3-phosphate dehydrogenase, cytosolic
trEMBLtr|I3SYQ7|I3SYQ7_LOTJA0Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007373204044740+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00134GAPDH, gapA EC:1.2.1.12 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Carbon fixation in photosynthetic organismsmap00710
HIF-1 signaling pathwaymap04066
Alzheimer's diseasemap05010


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000737s00020113.4PF00044.19Gp_dh_N2627.00E-16
Glyur000737s00020113.4PF00044.19Gp_dh_N841226.10E-12
Glyur000737s00020113.4PF02800.15Gp_dh_C1272841.70E-74


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control721.828
SRR1783600control727.067
SRR1783602moderate drought stress566.580
SRR1811619moderate drought stress564.437

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1063.370
DRR006520Root Summer glycyrrhizin high producing strain1028.260
DRR006521Root Winter glycyrrhizin high producing strain1353.666
DRR006522Root Winter glycyrrhizin high producing strain1301.160
DRR006523Root Summer glycyrrhizin low producing strain1293.587
DRR006524Root Summer glycyrrhizin low producing strain1306.537
DRR006525Leaf Summer glycyrrhizin high producing strain369.085
DRR006526Leaf Summer glycyrrhizin high producing strain366.301

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1170.821
SRR2868004Drought Stress(Tissue:root)916.184
SRR2967015Control (Tissue:root)814.643

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave511.481
SRR9715740Leave422.444
SRR9715741Leave484.139
SRR9715739Root1434.760
SRR9715742Root964.719
SRR9715743Root1085.084

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h975.816
SRR8749028MeJA induced 9h966.600
SRR8749029MeJA induced 9h659.447
SRR8749030Uninduced605.964
SRR8749031Uninduced328.600
SRR8749032Uninduced585.185

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root866.050
SRR8400027Control-Root868.798

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved