Gene detail information of Glyur000740s00028691.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49770.1 | 6.00E-29 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_004505238.1 | 4.71E-80 | PREDICTED: transcription factor bHLH95-like [Cicer arietinum] |
| Swissprot | tr|Q9FXA3|BH095_ARATH | 7.00E-44 | Transcription factor bHLH95 |
| trEMBL | tr|K7K7J0|K7K7J0_SOYBN | 1.00E-77 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G11500.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00740 | 36163 | 40527 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000740s00028691.1 | PF00010.21 | HLH | 78 | 125 | 1.10E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.198 |
| SRR1783600 | control | 0.212 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.338 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.351 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.247 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.249 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.766 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.337 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.049 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.057 |
| SRR9715742 | Root | 0.288 |
| SRR9715743 | Root | 0.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.225 |
| SRR8749028 | MeJA induced 9h | 4.069 |
| SRR8749029 | MeJA induced 9h | 8.982 |
| SRR8749030 | Uninduced | 6.121 |
| SRR8749031 | Uninduced | 1.053 |
| SRR8749032 | Uninduced | 3.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.018 |
| SRR8400027 | Control-Root | 0.026 |