Gene detail information of Glyur000743s00019293.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52250.1 | 6.00E-101 | Duplicated homeodomain-like superfamily protein |
| NR | XP_004496318.1 | 0 | PREDICTED: uncharacterized protein LOC101504689 isoform X1 [Cicer arietinum] |
| trEMBL | tr|K7N457|K7N457_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G31871.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00743 | 70912 | 79708 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000743s00019293.1 | PF00249.26 | Myb_DNA-binding | 800 | 841 | 9.60E-07 |
| Glyur000743s00019293.1 | PF00249.26 | Myb_DNA-binding | 1016 | 1055 | 3.30E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.084 |
| SRR1783600 | control | 21.174 |
| SRR1783602 | moderate drought stress | 22.644 |
| SRR1811619 | moderate drought stress | 22.577 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.156 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.034 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 27.817 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.378 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.127 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.492 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.033 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.912 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 39.287 |
| SRR2868004 | Drought Stress(Tissue:root) | 47.661 |
| SRR2967015 | Control (Tissue:root) | 49.632 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 21.238 |
| SRR9715740 | Leave | 25.876 |
| SRR9715741 | Leave | 22.854 |
| SRR9715739 | Root | 7.660 |
| SRR9715742 | Root | 41.181 |
| SRR9715743 | Root | 36.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.647 |
| SRR8749028 | MeJA induced 9h | 45.550 |
| SRR8749029 | MeJA induced 9h | 18.756 |
| SRR8749030 | Uninduced | 13.449 |
| SRR8749031 | Uninduced | 21.282 |
| SRR8749032 | Uninduced | 23.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 43.035 |
| SRR8400027 | Control-Root | 46.603 |