Gene detail information of Glyur000743s00019299.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50840.1 | 4.00E-108 | |
| NR | XP_007143680.1 | 0 | hypothetical protein PHAVU_007G092600g [Phaseolus vulgaris] |
| trEMBL | tr|V7BCZ3|V7BCZ3_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW15674.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00743 | 107679 | 121410 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000743s00019299.1 | PF09728.4 | Taxilin | 174 | 441 | 5.00E-77 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.178 |
| SRR1783600 | control | 20.034 |
| SRR1783602 | moderate drought stress | 20.690 |
| SRR1811619 | moderate drought stress | 21.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.481 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.962 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.516 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.044 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 38.373 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.340 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.430 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.254 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 29.104 |
| SRR2868004 | Drought Stress(Tissue:root) | 25.993 |
| SRR2967015 | Control (Tissue:root) | 25.938 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 13.731 |
| SRR9715740 | Leave | 17.971 |
| SRR9715741 | Leave | 17.992 |
| SRR9715739 | Root | 1.420 |
| SRR9715742 | Root | 8.192 |
| SRR9715743 | Root | 5.969 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.791 |
| SRR8749028 | MeJA induced 9h | 28.011 |
| SRR8749029 | MeJA induced 9h | 31.294 |
| SRR8749030 | Uninduced | 13.406 |
| SRR8749031 | Uninduced | 5.760 |
| SRR8749032 | Uninduced | 9.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 33.098 |
| SRR8400027 | Control-Root | 32.296 |