Gene detail information of Glyur000744s00021926.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G44170.2 | 2.00E-15 | aldehyde dehydrogenase 3H1 |
| NR | KHN20142.1 | 1.09E-28 | Aldehyde dehydrogenase family 3 member I1, chloroplastic [Glycine soja] |
| COG | YP_004468471.1 | 2.00E-11 | NAD-dependent aldehyde dehydrogenase [Alteromonas sp. SN2] |
| Swissprot | tr|Q70DU8|AL3H1_ARATH | 1.00E-17 | Aldehyde dehydrogenase family 3 member H1 |
| trEMBL | tr|K7M6X2|K7M6X2_SOYBN | 4.00E-29 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G24115.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00744 | 4188 | 4656 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.269 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.363 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.510 |
| SRR2967015 | Control (Tissue:root) | 2.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.527 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.067 |
| SRR9715739 | Root | 0.211 |
| SRR9715742 | Root | 0.257 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.011 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.051 |
| SRR8749032 | Uninduced | 0.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.972 |
| SRR8400027 | Control-Root | 0.560 |