Gene detail information of Glyur000744s00021931.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21780.2 | 8.00E-138 | BTB/POZ domain-containing protein |
| NR | KEH40519.1 | 0 | BTB/POZ domain plant protein [Medicago truncatula] |
| Swissprot | tr|Q9XHZ8|Y1178_ARATH | 4.00E-172 | BTB/POZ domain-containing protein At1g21780 |
| trEMBL | tr|A0A072VES8|A0A072VES8_MEDTR | 0 | BTB/POZ domain plant protein {ECO:0000313|EMBL:KEH40519.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00744 | 25092 | 27560 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | TRAF |
| Ubiquitin Family | BTB |
| Ubiquitin Family | 3-box |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000744s00021931.1 | PF00651.26 | BTB | 189 | 293 | 8.50E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 38.105 |
| SRR1783600 | control | 38.182 |
| SRR1783602 | moderate drought stress | 41.491 |
| SRR1811619 | moderate drought stress | 41.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.631 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 42.108 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.150 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.104 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.650 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 37.698 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.652 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 28.561 |
| SRR2868004 | Drought Stress(Tissue:root) | 35.435 |
| SRR2967015 | Control (Tissue:root) | 35.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 28.283 |
| SRR9715740 | Leave | 35.057 |
| SRR9715741 | Leave | 33.597 |
| SRR9715739 | Root | 16.899 |
| SRR9715742 | Root | 27.474 |
| SRR9715743 | Root | 27.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.486 |
| SRR8749028 | MeJA induced 9h | 11.350 |
| SRR8749029 | MeJA induced 9h | 11.788 |
| SRR8749030 | Uninduced | 7.422 |
| SRR8749031 | Uninduced | 4.384 |
| SRR8749032 | Uninduced | 6.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 46.897 |
| SRR8400027 | Control-Root | 49.397 |