Gene detail information of Glyur000744s00021934.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_008800899.1 | 6.82E-09 | PREDICTED: protein FAR1-RELATED SEQUENCE 6-like isoform X2 [Phoenix dactylifera] |
| trEMBL | tr|A0A096RPK9|A0A096RPK9_MAIZE | 7.00E-09 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G106653_P01} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00744 | 35487 | 40950 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | FAR1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000744s00021934.1 | PF03101.10 | FAR1 | 112 | 155 | 0.00023 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.003 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.309 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.447 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.499 |
| SRR2967015 | Control (Tissue:root) | 1.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.027 |
| SRR9715740 | Leave | 0.002 |
| SRR9715741 | Leave | 0.036 |
| SRR9715739 | Root | 0.018 |
| SRR9715742 | Root | 0.010 |
| SRR9715743 | Root | 0.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.872 |
| SRR8749028 | MeJA induced 9h | 0.190 |
| SRR8749029 | MeJA induced 9h | 0.323 |
| SRR8749030 | Uninduced | 0.070 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.009 |
| SRR8400027 | Control-Root | 0.004 |