Gene detail information of Glyur000748s00025524.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G15870.12.00E-159glycosyl hydrolase family 81 protein
NRXP_007139480.10hypothetical protein PHAVU_008G033000g [Phaseolus vulgaris]
COGYP_008154648.11.00E-70hypothetical protein SCE1572_41440 [Sorangium cellulosum So0157-2]
trEMBLtr|V7B0X4|V7B0X4_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW11474.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007485472056893+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH81


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0016998  cell wall macromolecule catabolic process


molecular_function

GO:0052861  glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group

GO:0052862  glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000748s00025524.1PF03639.8Glyco_hydro_8194962.20E-142


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.870
SRR1783600control1.722
SRR1783602moderate drought stress0.914
SRR1811619moderate drought stress0.959

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.367
DRR006520Root Summer glycyrrhizin high producing strain2.334
DRR006521Root Winter glycyrrhizin high producing strain0.097
DRR006522Root Winter glycyrrhizin high producing strain0.071
DRR006523Root Summer glycyrrhizin low producing strain10.834
DRR006524Root Summer glycyrrhizin low producing strain11.145
DRR006525Leaf Summer glycyrrhizin high producing strain6.284
DRR006526Leaf Summer glycyrrhizin high producing strain5.876

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.221
SRR2868004Drought Stress(Tissue:root)9.781
SRR2967015Control (Tissue:root)6.846

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.840
SRR9715740Leave15.721
SRR9715741Leave10.100
SRR9715739Root6.724
SRR9715742Root4.048
SRR9715743Root4.851

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.128
SRR8749028MeJA induced 9h28.851
SRR8749029MeJA induced 9h14.862
SRR8749030Uninduced7.891
SRR8749031Uninduced25.410
SRR8749032Uninduced10.618

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.525
SRR8400027Control-Root6.593

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved