Gene detail information of Glyur000749s00022591.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24660.1 | 1.00E-52 | homeobox protein 22 |
| NR | XP_004489767.1 | 2.58E-115 | PREDICTED: ZF-HD homeobox protein At5g65410-like [Cicer arietinum] |
| Swissprot | tr|A2Z259|ZHD1_ORYSI | 9.00E-75 | Zinc-finger homeodomain protein 1 |
| trEMBL | tr|K7K6C7|K7K6C7_SOYBN | 6.00E-112 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G04550.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00749 | 10531 | 11304 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | zf-HD |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000749s00022591.1 | PF04770.7 | ZF-HD_dimer | 60 | 113 | 1.00E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.134 |
| SRR1783600 | control | 0.142 |
| SRR1783602 | moderate drought stress | 0.148 |
| SRR1811619 | moderate drought stress | 0.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.428 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.429 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.601 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.108 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.495 |
| SRR9715740 | Leave | 0.663 |
| SRR9715741 | Leave | 2.924 |
| SRR9715739 | Root | 0.193 |
| SRR9715742 | Root | 2.309 |
| SRR9715743 | Root | 2.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.094 |
| SRR8400027 | Control-Root | 1.727 |