Gene detail information of Glyur000751s00027026.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G16560.1 | 2.00E-40 | Homeodomain-like superfamily protein |
| NR | XP_004513340.1 | 2.58E-146 | PREDICTED: transcription repressor KAN1-like [Cicer arietinum] |
| Swissprot | tr|Q0J235|ROLL9_ORYSJ | 2.00E-39 | Probable transcription factor RL9 |
| trEMBL | tr|I1KJ97|I1KJ97_SOYBN | 3.00E-141 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G12070.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00751 | 63328 | 72422 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000751s00027026.1 | PF00249.26 | Myb_DNA-binding | 270 | 317 | 2.80E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.477 |
| SRR1783600 | control | 16.775 |
| SRR1783602 | moderate drought stress | 28.229 |
| SRR1811619 | moderate drought stress | 27.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.695 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.932 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.565 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.579 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.125 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.886 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.774 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.838 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.032 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.994 |
| SRR2967015 | Control (Tissue:root) | 8.666 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.252 |
| SRR9715740 | Leave | 6.873 |
| SRR9715741 | Leave | 6.904 |
| SRR9715739 | Root | 1.925 |
| SRR9715742 | Root | 7.571 |
| SRR9715743 | Root | 6.857 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.963 |
| SRR8749028 | MeJA induced 9h | 3.039 |
| SRR8749029 | MeJA induced 9h | 0.750 |
| SRR8749030 | Uninduced | 4.099 |
| SRR8749031 | Uninduced | 0.159 |
| SRR8749032 | Uninduced | 0.776 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 20.551 |
| SRR8400027 | Control-Root | 21.453 |