Gene detail

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Gene detail information of Glyur000751s00027028.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G73480.1	8.00E-133	alpha/beta-Hydrolases superfamily protein
NR	XP_004513342.1	0	PREDICTED: monoglyceride lipase-like [Cicer arietinum]
COG	YP_003758419.1	3.00E-44	alpha/beta hydrolase fold protein [Dehalogenimonas lykanthroporepellens BL-DC-9]
Swissprot	tr\|Q9C942\|CSE_ARATH	1.00E-33	Caffeoylshikimate esterase
trEMBL	tr\|A0A072UCF9\|A0A072UCF9_MEDTR	0	Alpha/beta hydrolase family protein {ECO:0000313\|EMBL:KEH26748.1}

Sequence

Transcript Sequence

>Glyur000751s00027028.2
ATGGCGACAGAGGCGTTTATTTTGAAGGAAAGCGCCTTGTTATCTCTGAGAGGATTGAAGAGCCTCTTCATGCTGATATATGCTATTGTCATGGTGCTTTTGTTGCCATTCAGAGGGAGGAGGAGGGTCTCTCCGGTTGAAAGATCCTGTGCCGGTGGCAGTGGTGGCGGCGGTAAGGAGGAGAAGCAGCAGCATCACGAGTGCCACCGGAAAGGGGCGGTGGTGCGTGTGCCGGCCAAGATGGTGCCATGGAAGAATAGCATCAGTGTTAAGGAGAGTAGTGGTGGTGGTGGTGGGGTGGTGGCAATGAGGGTGGTGGATCAGATGATGAGGAGGGACTTGGCCATAAGGAGAGTAATGGAGGATGGTGATCAGAGATGTTTGAGGGAGTATTGGCTTTTGGGAACCAAAAGGGGTGACACCATTTTCACCCAATGTTGGACTCCTGTTTCTGTTGAGATCAGGGGACTCGTTGTTCTTATGCATGGGCTTAATGAACACAGTGGTAGATATAGTAATTTTGCAAAGCAGCTGAATGCTAATGGCTACAAGGTTTATGGGATGGATTGGGTTGGCCATGGTGGAAGTGATGGGCTGCATGCATATGTCCATTCTCTTGATGATGCAGTTTCTGACATGAAAATATTTCTTGAGAAGGTTCTAACTGAAAATCCCGGGCTTCCATGTTTCTGCTATGGACACTCAACAGGTGCAGCAATTACCCTTAAGGCACTGCTTGACCCAAAGGTTGAAGCTTGCATTGCTGGNGCTACAATCACATCACCTGCAGTTGGAGTTGAGCCTTCTCATCCAATTTTGGTGGTACTTGCTCCTATAGTTTCATTTTTGCTGCCAAGATATCAATGTAATTCTGCATATAAGAAGGGGTTGCCAGTTTCTCGAGATCCAGAGGCTCTAAAAGCTAAGTATTCAGACCCNTTAGTATGTACTGGATCTCTTAGAGTGCGTACCGGCTATGAGATTCTTCGAATTACAAGCTACTTGCAGCAAAATCTCAGAAAACTGAGAGTTCCATTTCTTGTTCTTCATGGCACTGCTGATTCTGTGACGGATCCTTCTGCTTCTCAAAAACTGTATGAAGAAGCTTCCTCAACTGACAAAACTATCAAGTTGTATGAAGGATTCTCACATGACCTNCTCTTTGAACCTGAAAGAGAGGCNATCACTCAGGACATAATTCAATGGCTGAATAGGAGAATAGGAGATNAGTTAGAGCAGTGAGGGAAAATGTTATGGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00751	83323	87683	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01054	MGLL	EC:3.1.1.23	Glycerolipid metabolism	map00561
			Regulation of lipolysis in adipocyte	map04923
			Retrograde endocannabinoid signaling	map04723

Gene Ontology

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000751s00027028.2	PF12146.3	Hydrolase_4	139	217	3.40E-26

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.948
SRR1783600	control	1.014
SRR1783602	moderate drought stress	2.733
SRR1811619	moderate drought stress	2.646

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.422
DRR006520	Root Summer glycyrrhizin high producing strain	1.497
DRR006521	Root Winter glycyrrhizin high producing strain	20.177
DRR006522	Root Winter glycyrrhizin high producing strain	19.697
DRR006523	Root Summer glycyrrhizin low producing strain	0.597
DRR006524	Root Summer glycyrrhizin low producing strain	0.617
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.213
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.160

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	2.925
SRR2868004	Drought Stress(Tissue:root)	3.780
SRR2967015	Control (Tissue:root)	2.981

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	5.008
SRR9715740	Leave	3.692
SRR9715741	Leave	6.703
SRR9715739	Root	0.223
SRR9715742	Root	1.804
SRR9715743	Root	1.990

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.085
SRR8749028	MeJA induced 9h	13.562
SRR8749029	MeJA induced 9h	3.047
SRR8749030	Uninduced	16.133
SRR8749031	Uninduced	15.014
SRR8749032	Uninduced	21.890

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	8.589
SRR8400027	Control-Root	6.114