Gene detail information of Glyur000752s00022789.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G37500.13.00E-158arginine biosynthesis protein ArgJ family
NRKHN48990.10Arginine biosynthesis bifunctional protein ArgJ, chloroplastic [Glycine soja]
COGYP_007124410.17.00E-149glutamate N-acetyltransferase/amino-acid acetyltransferase [Microcoleus sp. PCC 7113]
Swissprottr|Q9ZUR7|ARGJ_ARATH0Arginine biosynthesis bifunctional protein ArgJ beta chain {ECO:0000255|HAMAP-Rule:MF_03124} (Precursor)
trEMBLtr|I1LYU9|I1LYU9_SOYBN0Arginine biosynthesis bifunctional protein ArgJ, chloroplastic {ECO:0000256|HAMAP-Rule:MF_03124}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007521427144-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00620argJ EC:2.3.1.35 2.3.1.1 2-Oxocarboxylic acid metabolism map01210
Biosynthesis of amino acidsmap01230
Arginine biosynthesismap00220


Gene Ontology

biological_process

GO:0006526  arginine biosynthetic process


molecular_function

GO:0004358  glutamate N-acetyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000752s00022789.1PF01960.13ArgJ484362.20E-133


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.210
SRR1783600control20.306
SRR1783602moderate drought stress16.313
SRR1811619moderate drought stress15.898

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.878
DRR006520Root Summer glycyrrhizin high producing strain20.588
DRR006521Root Winter glycyrrhizin high producing strain13.470
DRR006522Root Winter glycyrrhizin high producing strain13.292
DRR006523Root Summer glycyrrhizin low producing strain22.751
DRR006524Root Summer glycyrrhizin low producing strain23.278
DRR006525Leaf Summer glycyrrhizin high producing strain14.431
DRR006526Leaf Summer glycyrrhizin high producing strain14.343

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)30.189
SRR2868004Drought Stress(Tissue:root)23.408
SRR2967015Control (Tissue:root)23.665

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.704
SRR9715740Leave20.190
SRR9715741Leave16.664
SRR9715739Root4.471
SRR9715742Root11.909
SRR9715743Root10.427

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.824
SRR8749028MeJA induced 9h21.509
SRR8749029MeJA induced 9h17.660
SRR8749030Uninduced10.836
SRR8749031Uninduced7.956
SRR8749032Uninduced7.429

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.627
SRR8400027Control-Root25.251

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved