Gene detail information of Glyur000753s00021276.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G26270.10phosphofructokinase 3
NRXP_003620763.106-phosphofructokinase [Medicago truncatula]
COGYP_003804939.11.00E-126phosphofructokinase [Spirochaeta smaragdinae DSM 11293]
Swissprottr|Q94AA4|PFKA3_ARATH0ATP-dependent 6-phosphofructokinase 3 {ECO:0000255|HAMAP-Rule:MF_03186}
trEMBLtr|G7KHY6|G7KHY6_MEDTR06-phosphofructokinase {ECO:0000313|EMBL:AES76981.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007531237018310-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00850pfkA, PFK EC:2.7.1.11 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Galactose metabolismmap00052
Methane metabolismmap00680
RNA degradationmap03018
AMPK signaling pathwaymap04152
Central carbon metabolism in cancermap05230


Gene Ontology

biological_process

GO:0006002  fructose 6-phosphate metabolic process

GO:0006096  glycolytic process


molecular_function

GO:0003872  6-phosphofructokinase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000753s00021276.2PF00365.15PFK903301.20E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control43.964
SRR1783600control43.814
SRR1783602moderate drought stress40.862
SRR1811619moderate drought stress40.605

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain48.784
DRR006520Root Summer glycyrrhizin high producing strain47.928
DRR006521Root Winter glycyrrhizin high producing strain31.641
DRR006522Root Winter glycyrrhizin high producing strain30.216
DRR006523Root Summer glycyrrhizin low producing strain52.029
DRR006524Root Summer glycyrrhizin low producing strain51.621
DRR006525Leaf Summer glycyrrhizin high producing strain86.225
DRR006526Leaf Summer glycyrrhizin high producing strain85.698

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)129.274
SRR2868004Drought Stress(Tissue:root)132.275
SRR2967015Control (Tissue:root)84.788

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave88.786
SRR9715740Leave87.796
SRR9715741Leave105.093
SRR9715739Root18.061
SRR9715742Root55.064
SRR9715743Root50.813

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h58.700
SRR8749028MeJA induced 9h86.190
SRR8749029MeJA induced 9h118.504
SRR8749030Uninduced102.634
SRR8749031Uninduced462.962
SRR8749032Uninduced516.595

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root115.104
SRR8400027Control-Root112.721

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved