Gene detail information of Glyur000753s00021278.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G29230.1 | 6.00E-113 | NAC domain containing protein 75 |
| NR | KHN40359.1 | 0 | NAC domain-containing protein 8 [Glycine soja] |
| Swissprot | tr|Q6NQK2|NAC8_ARATH | 2.00E-69 | NAC domain-containing protein 8 |
| trEMBL | tr|K7L1D9|K7L1D9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G15180.5} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00753 | 30422 | 35522 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000753s00021278.1 | PF02365.10 | NAM | 52 | 194 | 1.50E-33 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.967 |
| SRR1783600 | control | 4.092 |
| SRR1783602 | moderate drought stress | 5.254 |
| SRR1811619 | moderate drought stress | 5.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.896 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.785 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.918 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.966 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.768 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.954 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.696 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.656 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.186 |
| SRR2967015 | Control (Tissue:root) | 7.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.679 |
| SRR9715740 | Leave | 1.816 |
| SRR9715741 | Leave | 2.428 |
| SRR9715739 | Root | 0.166 |
| SRR9715742 | Root | 1.502 |
| SRR9715743 | Root | 1.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.070 |
| SRR8749031 | Uninduced | 0.322 |
| SRR8749032 | Uninduced | 0.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.587 |
| SRR8400027 | Control-Root | 13.939 |