Gene detail information of Glyur000753s00021296.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G26300.12.00E-70Arginyl-tRNA synthetase, class Ic
NRXP_004513062.13.44E-95PREDICTED: arginine--tRNA ligase, cytoplasmic-like isoform X2 [Cicer arietinum]
COGYP_003710058.13.00E-40Arginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
trEMBLtr|I1LA73|I1LA73_SOYBN3.00E-91Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G17590.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00753118647121113-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01887RARS, argS EC:6.1.1.19 Aminoacyl-tRNA biosynthesis map00970


Gene Ontology

biological_process

GO:0006418  tRNA aminoacylation for protein translation

GO:0006420  arginyl-tRNA aminoacylation


molecular_function

GO:0000166  nucleotide binding

GO:0004812  aminoacyl-tRNA ligase activity

GO:0004814  arginine-tRNA ligase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000753s00021296.1PF05746.10DALR_1301455.10E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.828
SRR1783600control8.815
SRR1783602moderate drought stress8.518
SRR1811619moderate drought stress8.353

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.387
DRR006520Root Summer glycyrrhizin high producing strain9.800
DRR006521Root Winter glycyrrhizin high producing strain9.788
DRR006522Root Winter glycyrrhizin high producing strain10.397
DRR006523Root Summer glycyrrhizin low producing strain14.088
DRR006524Root Summer glycyrrhizin low producing strain13.908
DRR006525Leaf Summer glycyrrhizin high producing strain16.606
DRR006526Leaf Summer glycyrrhizin high producing strain16.127

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.625
SRR2868004Drought Stress(Tissue:root)12.673
SRR2967015Control (Tissue:root)11.836

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.268
SRR9715740Leave36.391
SRR9715741Leave23.861
SRR9715739Root2.323
SRR9715742Root7.603
SRR9715743Root7.074

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h28.889
SRR8749028MeJA induced 9h16.185
SRR8749029MeJA induced 9h34.037
SRR8749030Uninduced25.089
SRR8749031Uninduced20.476
SRR8749032Uninduced18.068

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.097
SRR8400027Control-Root15.747

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved