Gene detail information of Glyur000755s00017976.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G32260.11.00E-120phosphorylcholine cytidylyltransferase
NRXP_003533684.10PREDICTED: choline-phosphate cytidylyltransferase 1-like [Glycine max]
COGYP_004672440.11.00E-20hypothetical protein SNE_A20720 [Simkania negevensis Z]
Swissprottr|Q9ZV56|CCT1_ARATH2.00E-153Choline-phosphate cytidylyltransferase 1
trEMBLtr|K7LBV6|K7LBV6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G05640.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007552573729811+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00968PCYT1 EC:2.7.7.15 Glycerophospholipid metabolism map00564
Phosphonate and phosphinate metabolismmap00440
Choline metabolism in cancermap05231


Gene Ontology

biological_process

GO:0009058  biosynthetic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000755s00017976.1PF01467.21CTP_transf_2802091.10E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control87.022
SRR1783600control87.230
SRR1783602moderate drought stress106.877
SRR1811619moderate drought stress106.073

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain63.487
DRR006520Root Summer glycyrrhizin high producing strain63.055
DRR006521Root Winter glycyrrhizin high producing strain145.021
DRR006522Root Winter glycyrrhizin high producing strain141.602
DRR006523Root Summer glycyrrhizin low producing strain124.022
DRR006524Root Summer glycyrrhizin low producing strain123.811
DRR006525Leaf Summer glycyrrhizin high producing strain47.993
DRR006526Leaf Summer glycyrrhizin high producing strain47.641

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)90.970
SRR2868004Drought Stress(Tissue:root)146.199
SRR2967015Control (Tissue:root)119.328

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave66.930
SRR9715740Leave58.686
SRR9715741Leave87.114
SRR9715739Root8.074
SRR9715742Root28.249
SRR9715743Root25.201

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h53.247
SRR8749028MeJA induced 9h81.281
SRR8749029MeJA induced 9h51.631
SRR8749030Uninduced63.508
SRR8749031Uninduced35.350
SRR8749032Uninduced21.866

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root94.936
SRR8400027Control-Root114.055

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved