Gene detail information of Glyur000755s00017981.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G44030.10cellulose synthase A4
NRAES65133.20cellulose synthase-like protein [Medicago truncatula]
COGYP_007129238.11.00E-14glycosyl transferase family 2 [Gloeocapsa sp. PCC 7428]
Swissprottr|Q941L0|CESA3_ARATH0Cellulose synthase A catalytic subunit 3 [UDP-forming]
trEMBLtr|G7INF0|G7INF0_MEDTR0Cellulose synthase {ECO:0000256|RuleBase:RU361116}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007554012345855-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0030244  cellulose biosynthetic process


cellular_component

GO:0016020  membrane


molecular_function

GO:0016760  cellulose synthase (UDP-forming) activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000755s00017981.1PF14569.1zf-UDP24784.10E-27
Glyur000755s00017981.1PF03552.9Cellulose_synt4599356.60E-242


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.976
SRR1783600control12.037
SRR1783602moderate drought stress10.430
SRR1811619moderate drought stress10.473

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.011
DRR006520Root Summer glycyrrhizin high producing strain20.707
DRR006521Root Winter glycyrrhizin high producing strain1.419
DRR006522Root Winter glycyrrhizin high producing strain1.285
DRR006523Root Summer glycyrrhizin low producing strain9.111
DRR006524Root Summer glycyrrhizin low producing strain8.989
DRR006525Leaf Summer glycyrrhizin high producing strain17.684
DRR006526Leaf Summer glycyrrhizin high producing strain17.452

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)63.454
SRR2868004Drought Stress(Tissue:root)59.717
SRR2967015Control (Tissue:root)54.161

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.890
SRR9715740Leave9.465
SRR9715741Leave3.499
SRR9715739Root5.431
SRR9715742Root49.513
SRR9715743Root40.069

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.095
SRR8749028MeJA induced 9h2.789
SRR8749029MeJA induced 9h3.069
SRR8749030Uninduced1.401
SRR8749031Uninduced2.357
SRR8749032Uninduced2.733

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root86.463
SRR8400027Control-Root140.615

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved