Gene detail information of Glyur000755s00017985.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G20070.12.00E-175allantoate amidohydrolase
NRXP_003533667.10PREDICTED: allantoate deiminase-like isoform X1 [Glycine max]
COGYP_003589856.11.00E-81hydantoinase/carbamoylase family amidase [Kyrpidia tusciae DSM 2912]
Swissprottr|O49434|AAH_ARATH0Allantoate deiminase (Precursor)
trEMBLtr|I1L153|I1L153_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G05600.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007556256667775+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02083allC EC:3.5.3.9 Purine metabolism map00230


Gene Ontology

biological_process

GO:0006508  proteolysis

GO:0008152  metabolic process


molecular_function

GO:0008237  metallopeptidase activity

GO:0016787  hydrolase activity

GO:0016813  hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000755s00017985.3PF01546.23Peptidase_M201164441.70E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.651
SRR1783600control12.313
SRR1783602moderate drought stress22.014
SRR1811619moderate drought stress22.930

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.037
DRR006520Root Summer glycyrrhizin high producing strain14.046
DRR006521Root Winter glycyrrhizin high producing strain79.320
DRR006522Root Winter glycyrrhizin high producing strain77.272
DRR006523Root Summer glycyrrhizin low producing strain52.466
DRR006524Root Summer glycyrrhizin low producing strain53.151
DRR006525Leaf Summer glycyrrhizin high producing strain23.844
DRR006526Leaf Summer glycyrrhizin high producing strain24.204

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.788
SRR2868004Drought Stress(Tissue:root)26.307
SRR2967015Control (Tissue:root)32.507

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave68.802
SRR9715740Leave72.170
SRR9715741Leave87.841
SRR9715739Root26.952
SRR9715742Root37.252
SRR9715743Root35.184

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.642
SRR8749028MeJA induced 9h32.601
SRR8749029MeJA induced 9h31.078
SRR8749030Uninduced47.704
SRR8749031Uninduced34.986
SRR8749032Uninduced49.790

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root71.245
SRR8400027Control-Root74.912

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved