Gene detail information of Glyur000755s00017996.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G20410.10monogalactosyldiacylglycerol synthase 2
NRXP_003541487.10PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like [Glycine max]
COGYP_005440390.13.00E-103monogalactosyldiacylglycerol synthase family protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
Swissprottr|O82730|MGDG2_ARATH0Monogalactosyldiacylglycerol synthase 2, chloroplastic (Precursor)
trEMBLtr|I1LZT6|I1LZT6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G23150.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0075599618103037+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT28


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03715E2.4.1.46 EC:2.4.1.46 Glycerolipid metabolism map00561


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0009247  glycolipid biosynthetic process

GO:0030259  lipid glycosylation


molecular_function

GO:0016758  transferase activity, transferring hexosyl groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000755s00017996.1PF06925.6MGDG_synth722401.80E-60
Glyur000755s00017996.1PF04101.11Glyco_tran_28_C2703871.30E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.937
SRR1783600control2.918
SRR1783602moderate drought stress2.443
SRR1811619moderate drought stress2.382

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.414
DRR006520Root Summer glycyrrhizin high producing strain3.304
DRR006521Root Winter glycyrrhizin high producing strain6.435
DRR006522Root Winter glycyrrhizin high producing strain6.225
DRR006523Root Summer glycyrrhizin low producing strain5.804
DRR006524Root Summer glycyrrhizin low producing strain5.694
DRR006525Leaf Summer glycyrrhizin high producing strain8.991
DRR006526Leaf Summer glycyrrhizin high producing strain8.793

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)40.610
SRR2868004Drought Stress(Tissue:root)22.133
SRR2967015Control (Tissue:root)26.232

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.974
SRR9715740Leave12.977
SRR9715741Leave12.485
SRR9715739Root5.758
SRR9715742Root8.604
SRR9715743Root6.876

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.606
SRR8749028MeJA induced 9h1.156
SRR8749029MeJA induced 9h1.417
SRR8749030Uninduced1.584
SRR8749031Uninduced2.406
SRR8749032Uninduced1.653

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.349
SRR8400027Control-Root51.351

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved