Gene detail information of Glyur000757s00023969.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G24480.10Protein kinase superfamily protein
NRXP_006578285.10PREDICTED: serine/threonine-protein kinase CTR1-like [Glycine max]
COGYP_001958461.12.00E-37hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q05609|CTR1_ARATH2.00E-111Serine/threonine-protein kinase CTR1
trEMBLtr|I1JV83|I1JV83_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G10270.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007572383730864-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000757s00023969.1PF14381.1EDR1602703.70E-68
Glyur000757s00023969.1PF07714.12Pkinase_Tyr4637032.60E-54


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.980
SRR1783600control6.265
SRR1783602moderate drought stress5.080
SRR1811619moderate drought stress5.045

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.552
DRR006520Root Summer glycyrrhizin high producing strain1.649
DRR006521Root Winter glycyrrhizin high producing strain1.582
DRR006522Root Winter glycyrrhizin high producing strain1.582
DRR006523Root Summer glycyrrhizin low producing strain1.679
DRR006524Root Summer glycyrrhizin low producing strain1.646
DRR006525Leaf Summer glycyrrhizin high producing strain1.675
DRR006526Leaf Summer glycyrrhizin high producing strain1.833

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.536
SRR2868004Drought Stress(Tissue:root)0.877
SRR2967015Control (Tissue:root)0.849

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.612
SRR9715740Leave0.879
SRR9715741Leave0.970
SRR9715739Root1.301
SRR9715742Root2.564
SRR9715743Root1.768

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.193
SRR8749028MeJA induced 9h0.013
SRR8749029MeJA induced 9h0.204
SRR8749030Uninduced0.015
SRR8749031Uninduced0.000
SRR8749032Uninduced0.078

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.548
SRR8400027Control-Root9.060

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved