Gene detail information of Glyur000759s00034218.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G14840.21.00E-86Leucine-rich repeat transmembrane protein kinase
NRKCW67565.12.20E-163hypothetical protein EUGRSUZ_F01314 [Eucalyptus grandis]
COGYP_004736851.12.00E-07hypothetical protein zobellia_2417 [Zobellia galactanivorans]
Swissprottr|C0LGE0|Y1765_ARATH1.00E-109Probable LRR receptor-like serine/threonine-protein kinase At1g07650 (Precursor)
trEMBLtr|A0A059BPB6|A0A059BPB6_EUCGR8.00E-164Uncharacterized protein {ECO:0000313|EMBL:KCW67565.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007593335341741-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.1
Carbohydrate-Active enzymes FamilyCBM57


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000759s00034218.2PF11721.3Malectin282136.90E-51
Glyur000759s00034218.2PF07714.12Pkinase_Tyr2883722.30E-16
Glyur000759s00034218.2PF07714.12Pkinase_Tyr3754241.90E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.875
SRR1783600control0.997
SRR1783602moderate drought stress1.562
SRR1811619moderate drought stress1.605

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.628
DRR006520Root Summer glycyrrhizin high producing strain2.247
DRR006521Root Winter glycyrrhizin high producing strain8.498
DRR006522Root Winter glycyrrhizin high producing strain8.154
DRR006523Root Summer glycyrrhizin low producing strain1.345
DRR006524Root Summer glycyrrhizin low producing strain1.680
DRR006525Leaf Summer glycyrrhizin high producing strain5.901
DRR006526Leaf Summer glycyrrhizin high producing strain5.972

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.451
SRR2868004Drought Stress(Tissue:root)6.776
SRR2967015Control (Tissue:root)6.722

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.343
SRR9715740Leave9.560
SRR9715741Leave25.396
SRR9715739Root0.268
SRR9715742Root0.801
SRR9715743Root0.529

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.666
SRR8400027Control-Root1.586

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved