Gene detail information of Glyur000762s00020826.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G36850.10glucan synthase-like 8
NRXP_004501831.10PREDICTED: callose synthase 10-like [Cicer arietinum]
Swissprottr|Q9SJM0|CALSA_ARATH0Callose synthase 10
trEMBLtr|V4TNM2|V4TNM2_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR53255.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0076252533904+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT48


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006075  (1->3)-beta-D-glucan biosynthetic process


cellular_component

GO:0000148  1,3-beta-D-glucan synthase complex

GO:0016020  membrane


molecular_function

GO:0003843  1,3-beta-D-glucan synthase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000762s00020826.1PF02364.10Glucan_synthase3484442.70E-26
Glyur000762s00020826.1PF02364.10Glucan_synthase4467028.10E-66
Glyur000762s00020826.1PF02364.10Glucan_synthase7598823.40E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.054
SRR1783600control21.499
SRR1783602moderate drought stress27.527
SRR1811619moderate drought stress26.795

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.375
DRR006520Root Summer glycyrrhizin high producing strain22.074
DRR006521Root Winter glycyrrhizin high producing strain33.536
DRR006522Root Winter glycyrrhizin high producing strain32.986
DRR006523Root Summer glycyrrhizin low producing strain30.673
DRR006524Root Summer glycyrrhizin low producing strain30.075
DRR006525Leaf Summer glycyrrhizin high producing strain10.886
DRR006526Leaf Summer glycyrrhizin high producing strain10.333

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)53.292
SRR2868004Drought Stress(Tissue:root)49.290
SRR2967015Control (Tissue:root)47.268

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.596
SRR9715740Leave21.046
SRR9715741Leave23.188
SRR9715739Root7.577
SRR9715742Root33.865
SRR9715743Root29.507

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h40.260
SRR8749028MeJA induced 9h70.394
SRR8749029MeJA induced 9h31.470
SRR8749030Uninduced32.508
SRR8749031Uninduced21.941
SRR8749032Uninduced26.293

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root52.917
SRR8400027Control-Root52.449

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved