Gene detail information of Glyur000764s00026026.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G09530.2 | 5.00E-26 | phytochrome interacting factor 3 |
| NR | XP_007163252.1 | 7.36E-146 | hypothetical protein PHAVU_001G218800g [Phaseolus vulgaris] |
| Swissprot | tr|Q8L5W8|PIL1_ARATH | 5.00E-34 | Transcription factor PIL1 |
| trEMBL | tr|V7D225|V7D225_PHAVU | 3.00E-146 | Uncharacterized protein {ECO:0000313|EMBL:ESW35246.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00764 | 77318 | 79946 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000764s00026026.1 | PF00010.21 | HLH | 403 | 447 | 5.60E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.364 |
| SRR1783600 | control | 0.419 |
| SRR1783602 | moderate drought stress | 0.629 |
| SRR1811619 | moderate drought stress | 0.601 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.258 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.288 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.232 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.227 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.312 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.263 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.798 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.244 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.400 |
| SRR2967015 | Control (Tissue:root) | 4.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.798 |
| SRR9715740 | Leave | 38.462 |
| SRR9715741 | Leave | 8.200 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.067 |
| SRR9715743 | Root | 0.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.012 |
| SRR8749028 | MeJA induced 9h | 1.198 |
| SRR8749029 | MeJA induced 9h | 1.753 |
| SRR8749030 | Uninduced | 1.301 |
| SRR8749031 | Uninduced | 1.883 |
| SRR8749032 | Uninduced | 0.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.436 |
| SRR8400027 | Control-Root | 0.999 |