Gene detail information of Glyur000764s00026028.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G01680.1 | 1.00E-78 | myb domain protein 55 |
| NR | XP_007163255.1 | 0 | hypothetical protein PHAVU_001G219000g [Phaseolus vulgaris] |
| Swissprot | tr|Q8LPH6|MYB86_ARATH | 7.00E-82 | Transcription factor MYB86 |
| trEMBL | tr|V7CYS2|V7CYS2_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW35249.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00764 | 90154 | 91930 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000764s00026028.1 | PF00249.26 | Myb_DNA-binding | 14 | 61 | 9.70E-15 |
| Glyur000764s00026028.1 | PF00249.26 | Myb_DNA-binding | 67 | 110 | 2.80E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.432 |
| SRR1783600 | control | 2.479 |
| SRR1783602 | moderate drought stress | 2.785 |
| SRR1811619 | moderate drought stress | 2.678 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.500 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.517 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.071 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.069 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.271 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.272 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.342 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.939 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.508 |
| SRR2967015 | Control (Tissue:root) | 3.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.907 |
| SRR9715740 | Leave | 6.791 |
| SRR9715741 | Leave | 6.589 |
| SRR9715739 | Root | 1.573 |
| SRR9715742 | Root | 6.390 |
| SRR9715743 | Root | 4.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.043 |
| SRR8749029 | MeJA induced 9h | 0.157 |
| SRR8749030 | Uninduced | 0.143 |
| SRR8749031 | Uninduced | 0.345 |
| SRR8749032 | Uninduced | 0.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.560 |
| SRR8400027 | Control-Root | 6.625 |