Gene detail information of Glyur000767s00028526.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G19920.11.00E-41Pseudouridine synthase/archaeosine transglycosylase-like family protein
NRACU21034.12.10E-53unknown [Glycine max]
Swissprottr|Q43870|APS2_ARATH6.00E-48ATP sulfurylase 2 (Precursor)
trEMBLtr|C6TGT2|C6TGT2_SOYBN8.00E-54Putative uncharacterized protein {ECO:0000313|EMBL:ACU21034.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007676022563128-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13811PAPSS EC:2.7.7.4 2.7.1.25 Sulfur metabolism map00920
Purine metabolismmap00230
Selenocompound metabolismmap00450
Monobactam biosynthesismap00261


Gene Ontology

molecular_function

GO:0004781  sulfate adenylyltransferase (ATP) activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000767s00028526.1PF14306.1PUA_216644.60E-08
Glyur000767s00028526.1PF01747.12ATP-sulfurylase1301988.60E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.446
SRR1783600control0.410
SRR1783602moderate drought stress2.933
SRR1811619moderate drought stress3.170

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.250
DRR006520Root Summer glycyrrhizin high producing strain0.597
DRR006521Root Winter glycyrrhizin high producing strain0.020
DRR006522Root Winter glycyrrhizin high producing strain0.083
DRR006523Root Summer glycyrrhizin low producing strain0.255
DRR006524Root Summer glycyrrhizin low producing strain0.102
DRR006525Leaf Summer glycyrrhizin high producing strain1.522
DRR006526Leaf Summer glycyrrhizin high producing strain1.764

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.630
SRR2868004Drought Stress(Tissue:root)0.611
SRR2967015Control (Tissue:root)0.530

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.101
SRR9715740Leave0.687
SRR9715741Leave0.239
SRR9715739Root0.481
SRR9715742Root0.024
SRR9715743Root0.000

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.532
SRR8749028MeJA induced 9h1.038
SRR8749029MeJA induced 9h0.556
SRR8749030Uninduced2.165
SRR8749031Uninduced1.281
SRR8749032Uninduced1.845

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.672
SRR8400027Control-Root0.876

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved