Gene detail information of Glyur000772s00033983.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54160.1 | 2.00E-89 | O-methyltransferase 1 |
| NR | KHN06374.1 | 1.18E-168 | Anthranilate N-methyltransferase [Glycine soja] |
| COG | YP_007130428.1 | 2.00E-35 | O-demethylpuromycin O-methyltransferase [Gloeocapsa sp. PCC 7428] |
| Swissprot | tr|A9X7L0|ANMT_RUTGR | 1.00E-124 | Anthranilate N-methyltransferase |
| trEMBL | tr|V7AP24|V7AP24_PHAVU | 1.00E-153 | Uncharacterized protein {ECO:0000313|EMBL:ESW07324.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00772 | 18066 | 22069 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13066 | E2.1.1.68, COMT | EC:2.1.1.68 | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000772s00033983.1 | PF08100.6 | Dimerisation | 39 | 88 | 2.70E-16 |
| Glyur000772s00033983.1 | PF00891.13 | Methyltransf_2 | 108 | 341 | 8.50E-74 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 119.420 |
| SRR1783600 | control | 119.715 |
| SRR1783602 | moderate drought stress | 79.509 |
| SRR1811619 | moderate drought stress | 77.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.160 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.160 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.431 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.949 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.667 |
| SRR2967015 | Control (Tissue:root) | 2.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.507 |
| SRR9715740 | Leave | 0.513 |
| SRR9715741 | Leave | 1.167 |
| SRR9715739 | Root | 176.538 |
| SRR9715742 | Root | 103.910 |
| SRR9715743 | Root | 112.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 142.895 |
| SRR8400027 | Control-Root | 83.777 |