Gene detail information of Glyur000775s00025737.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT5G07990.1 | 2.00E-93 | Cytochrome P450 superfamily protein |
NR | XP_006579509.1 | 0 | PREDICTED: flavonoid 3'-monooxygenase-like isoform X2 [Glycine max] |
COG | YP_003950164.1 | 2.00E-26 | cytochrome p450 [Stigmatella aurantiaca DW4/3-1] |
Swissprot | tr|Q9SBQ9|F3PH_PETHY | 5.00E-114 | Flavonoid 3'-monooxygenase |
trEMBL | tr|V7AX70|V7AX70_PHAVU | 2.00E-136 | Uncharacterized protein {ECO:0000313|EMBL:ESW10242.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00775 | 91296 | 95801 | + |
Gene family
Gene family | subfamily |
---|---|
Cytochrome P450 Family | CYP75B1 |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K05280 | E1.14.13.21 | EC:1.14.13.21 | Flavonoid biosynthesis | map00941 |
Flavone and flavonol biosynthesis | map00944 |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000775s00025737.1 | PF00067.17 | p450 | 32 | 143 | 1.30E-16 |
Glyur000775s00025737.1 | PF00067.17 | p450 | 141 | 334 | 7.20E-62 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 17.950 |
SRR1783600 | control | 16.066 |
SRR1783602 | moderate drought stress | 3.396 |
SRR1811619 | moderate drought stress | 3.494 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 0.200 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 0.249 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 2.491 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 2.411 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 1.325 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 1.529 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 68.147 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 70.327 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 61.797 |
SRR2868004 | Drought Stress(Tissue:root) | 168.852 |
SRR2967015 | Control (Tissue:root) | 209.308 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 99.109 |
SRR9715740 | Leave | 34.006 |
SRR9715741 | Leave | 38.047 |
SRR9715739 | Root | 23.437 |
SRR9715742 | Root | 14.058 |
SRR9715743 | Root | 16.065 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 2.755 |
SRR8749028 | MeJA induced 9h | 10.907 |
SRR8749029 | MeJA induced 9h | 2.924 |
SRR8749030 | Uninduced | 22.105 |
SRR8749031 | Uninduced | 15.614 |
SRR8749032 | Uninduced | 9.634 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 60.048 |
SRR8400027 | Control-Root | 42.699 |