Gene detail information of Glyur000776s00026219.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G14180.1 | 2.00E-55 | sequence-specific DNA binding transcription factors |
| NR | XP_007135401.1 | 1.58E-166 | hypothetical protein PHAVU_010G126400g [Phaseolus vulgaris] |
| Swissprot | tr|Q9LJG8|ASIL2_ARATH | 5.00E-107 | Trihelix transcription factor ASIL2 {ECO:0000305} |
| trEMBL | tr|V7APZ6|V7APZ6_PHAVU | 6.00E-167 | Uncharacterized protein {ECO:0000313|EMBL:ESW07395.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00776 | 90431 | 91582 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Trihelix |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000776s00026219.1 | PF13837.1 | Myb_DNA-bind_4 | 74 | 167 | 6.90E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 44.794 |
| SRR1783600 | control | 45.337 |
| SRR1783602 | moderate drought stress | 69.783 |
| SRR1811619 | moderate drought stress | 68.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.612 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.076 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 66.737 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 66.465 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 54.496 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 49.163 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.292 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 49.808 |
| SRR2868004 | Drought Stress(Tissue:root) | 56.309 |
| SRR2967015 | Control (Tissue:root) | 65.479 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 22.782 |
| SRR9715740 | Leave | 26.832 |
| SRR9715741 | Leave | 36.940 |
| SRR9715739 | Root | 17.983 |
| SRR9715742 | Root | 52.923 |
| SRR9715743 | Root | 41.722 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 36.686 |
| SRR8749028 | MeJA induced 9h | 83.399 |
| SRR8749029 | MeJA induced 9h | 44.503 |
| SRR8749030 | Uninduced | 60.401 |
| SRR8749031 | Uninduced | 42.047 |
| SRR8749032 | Uninduced | 77.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 80.836 |
| SRR8400027 | Control-Root | 62.689 |