Gene detail information of Glyur000779s00022829.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G24550.12.00E-29beta glucosidase 32
NRKHN25276.12.67E-51Beta-glucosidase 24 [Glycine soja]
COGYP_925769.14.00E-21beta-glucosidase [Nocardioides sp. JS614]
Swissprottr|P26204|BGLS_TRIRP5.00E-42Non-cyanogenic beta-glucosidase (Precursor)
trEMBLtr|I1LJS4|I1LJS4_SOYBN1.00E-48Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G13850.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007795151847-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01188E3.2.1.21 EC:3.2.1.21 Starch and sucrose metabolism map00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000779s00022829.1PF00232.13Glyco_hydro_142794.80E-12
Glyur000779s00022829.1PF00232.13Glyco_hydro_1811223.80E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.069
SRR1783600control1.215
SRR1783602moderate drought stress0.378
SRR1811619moderate drought stress0.484

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.454
DRR006520Root Summer glycyrrhizin high producing strain2.968
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain3.126
DRR006524Root Summer glycyrrhizin low producing strain4.347
DRR006525Leaf Summer glycyrrhizin high producing strain1.532
DRR006526Leaf Summer glycyrrhizin high producing strain1.516

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.199
SRR2868004Drought Stress(Tissue:root)85.543
SRR2967015Control (Tissue:root)49.367

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave58.767
SRR9715740Leave10.616
SRR9715741Leave121.420
SRR9715739Root0.779
SRR9715742Root22.573
SRR9715743Root20.374

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.705
SRR8749028MeJA induced 9h4.187
SRR8749029MeJA induced 9h0.912
SRR8749030Uninduced294.770
SRR8749031Uninduced109.308
SRR8749032Uninduced46.388

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.902
SRR8400027Control-Root46.148

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved