Gene detail information of Glyur000779s00022830.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G47600.22.00E-35beta glucosidase 34
NRNP_001237501.12.55E-86isoflavone conjugate-specific beta-glucosidase [Glycine max]
COGYP_007314362.11.00E-37beta-galactosidase [Halobacteroides halobius DSM 5150]
Swissprottr|P26204|BGLS_TRIRP4.00E-62Non-cyanogenic beta-glucosidase (Precursor)
trEMBLtr|Q08IT7|Q08IT7_SOYBN9.00E-87Isoflavone conjugate-specific beta-glucosidase {ECO:0000313|EMBL:BAF34333.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00779202921541-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01188E3.2.1.21 EC:3.2.1.21 Starch and sucrose metabolism map00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000779s00022830.1PF00232.13Glyco_hydro_1741571.30E-36
Glyur000779s00022830.1PF00232.13Glyco_hydro_12283243.10E-22
Glyur000779s00022830.1PF00232.13Glyco_hydro_13714007.10E-05
Glyur000779s00022830.1PF00232.13Glyco_hydro_14605523.20E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.274
SRR1783600control0.269
SRR1783602moderate drought stress0.210
SRR1811619moderate drought stress0.266

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.012
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.019
DRR006524Root Summer glycyrrhizin low producing strain0.016
DRR006525Leaf Summer glycyrrhizin high producing strain0.000
DRR006526Leaf Summer glycyrrhizin high producing strain0.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)164.736
SRR2868004Drought Stress(Tissue:root)117.114
SRR2967015Control (Tissue:root)118.236

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.122
SRR9715740Leave0.043
SRR9715741Leave0.289
SRR9715739Root0.191
SRR9715742Root0.268
SRR9715743Root0.212

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.840
SRR8749028MeJA induced 9h9.620
SRR8749029MeJA induced 9h6.767
SRR8749030Uninduced91.490
SRR8749031Uninduced679.412
SRR8749032Uninduced165.696

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.546
SRR8400027Control-Root18.059

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved