Gene detail information of Glyur000779s00022837.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G10290.10leucine-rich repeat transmembrane protein kinase family protein
NRXP_003525052.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290-like isoform X1 [Glycine max]
COGYP_007319008.12.00E-19hypothetical protein FAES_0403 [Fibrella aestuarina BUZ 2]
Swissprottr|C0LGT1|Y5129_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At5g10290 (Precursor)
trEMBLtr|K7KQX3|K7KQX3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G31120.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007795767165873+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000779s00022837.1PF08263.7LRRNT_224631.20E-09
Glyur000779s00022837.1PF12799.2LRR_4921284.50E-09
Glyur000779s00022837.1PF00560.28LRR_11401620.099
Glyur000779s00022837.1PF07714.12Pkinase_Tyr2915821.20E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.279
SRR1783600control19.330
SRR1783602moderate drought stress18.258
SRR1811619moderate drought stress18.166

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain28.231
DRR006520Root Summer glycyrrhizin high producing strain27.767
DRR006521Root Winter glycyrrhizin high producing strain28.887
DRR006522Root Winter glycyrrhizin high producing strain28.286
DRR006523Root Summer glycyrrhizin low producing strain31.690
DRR006524Root Summer glycyrrhizin low producing strain31.451
DRR006525Leaf Summer glycyrrhizin high producing strain26.475
DRR006526Leaf Summer glycyrrhizin high producing strain26.312

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)46.993
SRR2868004Drought Stress(Tissue:root)48.248
SRR2967015Control (Tissue:root)47.697

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave42.931
SRR9715740Leave60.106
SRR9715741Leave44.617
SRR9715739Root4.582
SRR9715742Root20.280
SRR9715743Root17.410

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h52.374
SRR8749028MeJA induced 9h34.837
SRR8749029MeJA induced 9h49.302
SRR8749030Uninduced34.119
SRR8749031Uninduced40.647
SRR8749032Uninduced40.366

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.765
SRR8400027Control-Root34.655

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved