Gene detail

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Gene detail information of Glyur000782s00036635.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G15740.1	0	O-fucosyltransferase family protein
NR	XP_004488503.1	0	PREDICTED: uncharacterized protein At1g04910-like [Cicer arietinum]
Swissprot	tr\|Q8W486\|Y1491_ARATH	2.00E-81	Uncharacterized protein At1g04910
trEMBL	tr\|G7IT24\|G7IT24_MEDTR	0	GDP-fucose O-fucosyltransferase-like protein {ECO:0000313\|EMBL:AES65954.2}

Sequence

Transcript Sequence

>Glyur000782s00036635.1
TGCTCTTTCTCTTTCCTTTCTGTAGCGGTTTTTTTTTTCTTCTTCTCTACGAGCCGAGCCGGTCTCGCATGTGTCACCAACCGTGAATACCTTCATTTTTTTTGTGTGTCTCTCTCTCGCTTTTGCGACGCGTTTTATTATTCACTCTCTTCTCTTTCATTTTTGGGTGCCTATTAATAATTGTGTACTCGCGCTCCGTTACTCTTCGACCGTTTCTCAGGCGCGAGAACCGGCGATTATTTCAGATCAGTCGCCGGCGATATCTCCGCCACCGTTCCGATTCCCTCGCTCGTTACGGTGCGTGCGGTTCCTTCCGAATTCGGAGATCTCGCCGTTTCGTGTTCCGATTCGGGTTCAGCGATTCGAGGTGGTGTAATGTAATGCGCCTGAGAATTCGAGGCTCTAACGTTGCTGCTTATCGAACTCTTTTGAGGTTCGTTTGAGGTTTGAATCTGGCTTCAATTTTTGGGTCGAGGAAGCCGAAATTCAAGTGTTTCTGTTGCCGTTGTTGCGATTGGAGTTCGAGTAAGCGGTTTTAGGGTTTGGAATTTGGCTGCATTGATCGAGGTAGTGGAGTGGGAGGGTTATGAAGGAGGCGTTGTTGTGGGGGAGAGAAGAGAGGAGTGAGAGGAAGAGAGGGAAATTGGTGTGGGAAGGGTTGGTGATGATGGTGACGATGGGTTTGAAGGGGGTGAGTGGTAATAACAGTAAGGTTGAGAAGCTGAGGAATACGGTGTCGTCTAGGTCGTCGACGTCGAGGATGAAGCTGTGGATGATTCGGGCGACCACATCGGTGTTACTGTGGACCTGCGTCGTTCAGTTAACTGCCTTGGGTGACATGTGGGGTCCTACTAGTAGAGTTTTGAAAGGTTTGCCTTCTTGTTTCTCACATGAATCCGCACTCATCGAGTTGCCTTCTGTGCGCCCCAGAGTTCTTCCACCCAAGAGGGTTTATAAGAACAATGGTTACTTGATGGTGTCGTGCAATGGAGGGCTAAACCAAATGAGAGCAGCGATATGTGATATGGTTGCCATTGCGAGATATTTAAATGTGACGCTCATAGTCCCTGAACTGGATAAAGCTTCCTTTTGGGCCGACCCCAGTGAGTTCCAAGACATATTTGATGTGGATCATTTTATTACATCCTTGAGAGATGAGGTGCGGATATTGAAAGAGTTGCCTCCTAGACTCAAGCAGAAAGTGGAAAACGGGTTCCTTTACAGCATGCCACCGATTAGTTGGTCTGACATGTCTTACTATAAGAACCAGATTCTACCACTGATACAAAAGTACAAAGTTGTACATTTAAATCGAACGGATGCTCGGCTGGCCAACAATGGCCAATCATTGGAGATTCAGAAGTTGCGTTGCCGAGTCAATTTTAGTGCTCTTAGATTTACTTCACAGATTGAGGAATTGGGCAGAAAGGTGATCAAGCTTCTGAGGCAAAATGGTCCATTTCTGGTACTTCATCTGAGGTATGAGATGGACATGTTGGCATTTTCTGGCTGTACTCAAGGTTGCAACAGTGATGAGGTGGAAGAATTGACAAGGATGAGATATGCTTATCCTTGGTGGAAAGAAAAAATAATTAATTCTGATTTGAAAAGAAAAGATGGTTTATGTCCTTTAACACCTGAGGAGACTGCCCTTACGCTTAGGGCCCTTGACATTGATCAAAACATTCAGATCTACATTGCAGCCGGGGAAATATACGGTGGGGACAGGAGAATGGCCAGTCTAACGAAGAACTATCCAAGAGTGGTCAGAAAGGAAACATTGTTGGAACCATCTGACCTTCAGTTCTTCCAAAATCATTCCTCTCAAATGGCGGCATTGGATTATCTTGTCTCCTTAGAGAGTGATATCTTTGTCCCTACATATGATGGAAATATGGCCAAAGTAGTCGAGGGTCATCGCAGATATCTGGGGTTCAAGAGAACCATTTTATTGAACAGAAAGCTCCTAGTTGATTTGATAGATCAATACAATAATGGAGTATTAAACTGGGATGAATTCTCTTCAGCTGTGAAGGAATCTCATGCTGATCGCATGGGCAGTGCAACTAAGAGATTGGTAATCCCTGACAGGCCTAAAGAAGAGGATTATTTCTATGCCAATCCAGAGGAGTGTTTAGAACCATCAGATGATCTGTTGAGCAGTACAGCATGAGTGGTGTTTGGAAATAATGGGAATTTTACCTGTGTCCTCTCCTAGTGCACTTGGCTTTCTACCACAGATACTAAGATTACAGAGTTTTAGCAAAGATGACAGCATTTTGTATCAAAGAAGAGGGCAGTCATATAGTGACTGTTAGAAGAAGGGGGGTGAAGGTTGGGGATAGACTTTGATGAAAGCTCGAGGAGGTCAAGATCAGTTGCTGGGGGGATAGTTTATATATAAAATTATGCAAATAATCCATCACATTCATGTATAGAAGTTACCCTGCCATTCCAGGGTGAGAGCATATCAAACTGCATTGTACACGGAGAGATTCATATACAAATTCTGATTTCTGGAACTGCAGTTCGTGGAAGCTTTATTCCTTGGTACCTTTCATTCTTTTCCTTCTCTCCTAAATATATAAATAAATATATATTATGAAGTTCTTTTTTCTCTTTTACCACACTTCTTATTTATCCATCACGATCGTTGTCATTTTCTGGGTAGCTTTCGGTCTTGATTCGGGATTAATAGGTTGGATATTTTTTTTTTGTATTATCTCTAATTTATATCCATATTTATATTCATATTTGACTCCGAGTTTCANTTTTCTTTAGTTCCTAATTGCTTACTTATGCTATCTTATCCNTCAACCCTCAAATAATATCCCAGAACCAAAGAACATATCTGAACTGG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00782	82112	86200	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GTnc

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000782s00036635.1	PF10250.4	O-FucT	130	451	1.80E-91

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	18.159
SRR1783600	control	18.266
SRR1783602	moderate drought stress	12.528
SRR1811619	moderate drought stress	12.506

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	27.642
DRR006520	Root Summer glycyrrhizin high producing strain	27.383
DRR006521	Root Winter glycyrrhizin high producing strain	11.634
DRR006522	Root Winter glycyrrhizin high producing strain	11.471
DRR006523	Root Summer glycyrrhizin low producing strain	30.782
DRR006524	Root Summer glycyrrhizin low producing strain	30.201
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.737
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.743

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	27.912
SRR2868004	Drought Stress(Tissue:root)	25.068
SRR2967015	Control (Tissue:root)	26.354

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	30.736
SRR9715740	Leave	20.364
SRR9715741	Leave	21.011
SRR9715739	Root	22.667
SRR9715742	Root	48.398
SRR9715743	Root	43.340

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.417
SRR8749028	MeJA induced 9h	16.684
SRR8749029	MeJA induced 9h	9.244
SRR8749030	Uninduced	6.845
SRR8749031	Uninduced	3.285
SRR8749032	Uninduced	4.859

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	41.737
SRR8400027	Control-Root	50.524