Gene detail information of Glyur000783s00023117.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G30600.40BTB/POZ domain-containing protein
NRAES98295.20BTB/POZ domain plant protein [Medicago truncatula]
Swissprottr|Q8LEV3|Y2060_ARATH0BTB/POZ domain-containing protein At2g30600
trEMBLtr|G7JYH5|G7JYH5_MEDTR0BTB/POZ domain plant protein {ECO:0000313|EMBL:AES98295.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007831616022382-


Gene family

Gene familysubfamily
Ubiquitin FamilyBTB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000783s00023117.1PF12248.3Methyltransf_FA461272.60E-15
Glyur000783s00023117.1PF00651.26BTB1322127.40E-08
Glyur000783s00023117.1PF00651.26BTB2523621.80E-20
Glyur000783s00023117.1PF07707.10BACK3764405.90E-06
Glyur000783s00023117.1PF00754.20F5_F8_type_C5766972.10E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control53.116
SRR1783600control54.130
SRR1783602moderate drought stress139.212
SRR1811619moderate drought stress138.277

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain57.607
DRR006520Root Summer glycyrrhizin high producing strain56.690
DRR006521Root Winter glycyrrhizin high producing strain31.707
DRR006522Root Winter glycyrrhizin high producing strain31.379
DRR006523Root Summer glycyrrhizin low producing strain58.867
DRR006524Root Summer glycyrrhizin low producing strain59.057
DRR006525Leaf Summer glycyrrhizin high producing strain10.397
DRR006526Leaf Summer glycyrrhizin high producing strain10.343

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)28.475
SRR2868004Drought Stress(Tissue:root)101.688
SRR2967015Control (Tissue:root)178.746

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave40.628
SRR9715740Leave66.907
SRR9715741Leave84.884
SRR9715739Root12.553
SRR9715742Root38.250
SRR9715743Root29.320

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h28.457
SRR8749028MeJA induced 9h37.664
SRR8749029MeJA induced 9h20.799
SRR8749030Uninduced34.830
SRR8749031Uninduced73.770
SRR8749032Uninduced111.574

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.067
SRR8400027Control-Root23.643

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved