Gene detail information of Glyur000783s00023118.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G35090.10catalase 2
NRCAD42908.10catalase [Prunus persica]
COGYP_007420475.19.00E-167Catalase [Bacillus thuringiensis serovar kurstaki str. HD73]
Swissprottr|O48560|CATA3_SOYBN0Catalase-3
trEMBLtr|Q7XTK9|Q7XTK9_PRUPE0Catalase {ECO:0000256|RuleBase:RU000498}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007832939632623+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03781katE, CAT, catB, srpA EC:1.11.1.6 Carbon metabolism map01200
Glyoxylate and dicarboxylate metabolismmap00630
Tryptophan metabolismmap00380
MAPK signaling pathway - plantmap04016
MAPK signaling pathway - yeastmap04011
FoxO signaling pathwaymap04068
Peroxisomemap04146
Longevity regulating pathway - mammalmap04211
Longevity regulating pathway - wormmap04212
Longevity regulating pathway - multiple speciesmap04213
Amyotrophic lateral sclerosis (ALS)map05014


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004096  catalase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000783s00023118.1PF00199.14Catalase184005.50E-182
Glyur000783s00023118.1PF06628.7Catalase-rel4204874.60E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.595
SRR1783600control25.579
SRR1783602moderate drought stress24.584
SRR1811619moderate drought stress24.717

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.708
DRR006520Root Summer glycyrrhizin high producing strain19.428
DRR006521Root Winter glycyrrhizin high producing strain2.711
DRR006522Root Winter glycyrrhizin high producing strain2.540
DRR006523Root Summer glycyrrhizin low producing strain14.651
DRR006524Root Summer glycyrrhizin low producing strain14.448
DRR006525Leaf Summer glycyrrhizin high producing strain2.350
DRR006526Leaf Summer glycyrrhizin high producing strain2.202

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.693
SRR2868004Drought Stress(Tissue:root)12.992
SRR2967015Control (Tissue:root)17.481

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.762
SRR9715740Leave29.770
SRR9715741Leave15.497
SRR9715739Root11.449
SRR9715742Root8.943
SRR9715743Root10.088

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h32.252
SRR8749028MeJA induced 9h35.852
SRR8749029MeJA induced 9h33.067
SRR8749030Uninduced11.274
SRR8749031Uninduced44.971
SRR8749032Uninduced60.542

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.039
SRR8400027Control-Root22.269

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved