Gene detail information of Glyur000783s00023124.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G20930.15.00E-145cyclin-dependent kinase B2;2
NRAFK45428.10unknown [Lotus japonicus]
COGYP_003131953.11.00E-17protein kinase family protein with PASTA domain-containing protein [Saccharomonospora viridis DSM 43017]
Swissprottr|Q8LG64|CKB22_ARATH0Cyclin-dependent kinase B2-2
trEMBLtr|I3SYT6|I3SYT6_LOTJA0Uncharacterized protein {ECO:0000313|EMBL:AFK45428.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007836863870596-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000783s00023124.1PF00069.20Pkinase353029.30E-58


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.095
SRR1783600control14.220
SRR1783602moderate drought stress9.273
SRR1811619moderate drought stress9.124

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.617
DRR006520Root Summer glycyrrhizin high producing strain20.667
DRR006521Root Winter glycyrrhizin high producing strain1.332
DRR006522Root Winter glycyrrhizin high producing strain1.462
DRR006523Root Summer glycyrrhizin low producing strain5.845
DRR006524Root Summer glycyrrhizin low producing strain6.129
DRR006525Leaf Summer glycyrrhizin high producing strain3.393
DRR006526Leaf Summer glycyrrhizin high producing strain3.303

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)79.961
SRR2868004Drought Stress(Tissue:root)36.114
SRR2967015Control (Tissue:root)43.993

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.151
SRR9715740Leave2.878
SRR9715741Leave6.529
SRR9715739Root14.991
SRR9715742Root11.382
SRR9715743Root10.208

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h151.772
SRR8749028MeJA induced 9h59.598
SRR8749029MeJA induced 9h90.243
SRR8749030Uninduced1.848
SRR8749031Uninduced1.054
SRR8749032Uninduced4.052

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root65.046
SRR8400027Control-Root49.157

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved