Gene detail information of Glyur000784s00031233.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G16040.18.00E-61
NRXP_004501099.12.43E-142PREDICTED: phosphatidylinositol-glycan biosynthesis class F protein-like isoform X1 [Cicer arietinum]
trEMBLtr|I1KZQ1|I1KZQ1_SOYBN9.00E-135Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G00300.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007843340937622-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05287PIGF EC:2.7.-.- Glycosylphosphatidylinositol(GPI)-anchor biosynthesis map00563


Gene Ontology

biological_process

GO:0006506  GPI anchor biosynthetic process


cellular_component

GO:0005789  endoplasmic reticulum membrane

GO:0016021  integral component of membrane


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000784s00031233.1PF06699.6PIG-F452194.70E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.373
SRR1783600control14.026
SRR1783602moderate drought stress12.428
SRR1811619moderate drought stress12.549

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.394
DRR006520Root Summer glycyrrhizin high producing strain13.567
DRR006521Root Winter glycyrrhizin high producing strain18.075
DRR006522Root Winter glycyrrhizin high producing strain17.507
DRR006523Root Summer glycyrrhizin low producing strain15.794
DRR006524Root Summer glycyrrhizin low producing strain15.816
DRR006525Leaf Summer glycyrrhizin high producing strain8.657
DRR006526Leaf Summer glycyrrhizin high producing strain9.155

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.480
SRR2868004Drought Stress(Tissue:root)27.172
SRR2967015Control (Tissue:root)24.015

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.757
SRR9715740Leave23.672
SRR9715741Leave25.077
SRR9715739Root14.732
SRR9715742Root20.567
SRR9715743Root19.157

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.421
SRR8749028MeJA induced 9h16.929
SRR8749029MeJA induced 9h12.299
SRR8749030Uninduced12.314
SRR8749031Uninduced4.482
SRR8749032Uninduced4.301

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.793
SRR8400027Control-Root24.957

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved