Gene detail information of Glyur000784s00031240.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31940.14.00E-89cytochrome P450, family 82, subfamily C, polypeptide 4
NRXP_004488195.10PREDICTED: cytochrome P450 82A3-like [Cicer arietinum]
COGYP_001545288.11.00E-19cytochrome P450 [Herpetosiphon aurantiacus DSM 785]
Swissprottr|O49858|C82A3_SOYBN2.00E-128Cytochrome P450 82A3
trEMBLtr|A0A072V8D1|A0A072V8D1_MEDTR0Cytochrome P450 family protein {ECO:0000313|EMBL:KEH37856.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00784107853111779+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP82C4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000784s00031240.1PF00067.17p450181141.30E-08
Glyur000784s00031240.1PF00067.17p4501543069.80E-33
Glyur000784s00031240.1PF00067.17p4503063781.20E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control101.340
SRR1783600control104.040
SRR1783602moderate drought stress129.886
SRR1811619moderate drought stress130.320

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain33.924
DRR006520Root Summer glycyrrhizin high producing strain32.784
DRR006521Root Winter glycyrrhizin high producing strain12.393
DRR006522Root Winter glycyrrhizin high producing strain11.850
DRR006523Root Summer glycyrrhizin low producing strain103.610
DRR006524Root Summer glycyrrhizin low producing strain105.898
DRR006525Leaf Summer glycyrrhizin high producing strain93.933
DRR006526Leaf Summer glycyrrhizin high producing strain95.674

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)77.706
SRR2868004Drought Stress(Tissue:root)120.162
SRR2967015Control (Tissue:root)130.904

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave124.422
SRR9715740Leave235.553
SRR9715741Leave230.042
SRR9715739Root82.825
SRR9715742Root141.651
SRR9715743Root137.074

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h45.574
SRR8749028MeJA induced 9h121.394
SRR8749029MeJA induced 9h48.125
SRR8749030Uninduced120.545
SRR8749031Uninduced68.352
SRR8749032Uninduced37.047

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root99.258
SRR8400027Control-Root84.468

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved