Gene detail information of Glyur000785s00024146.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G32320.11.00E-80ascorbate peroxidase 6
NRXP_003603389.16.88E-164hypothetical protein MTR_3g107060 [Medicago truncatula]
COGYP_003436559.12.00E-07catalase/peroxidase HPI [Ferroglobus placidus DSM 10642]
Swissprottr|Q8GY91|APX6_ARATH1.00E-108Putative L-ascorbate peroxidase 6
trEMBLtr|G7JB12|G7JB12_MEDTR3.00E-164L-ascorbate peroxidase {ECO:0000313|EMBL:AES73640.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007853103839+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00434E1.11.1.11 EC:1.11.1.11 Ascorbate and aldarate metabolism map00053
Glutathione metabolismmap00480


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000785s00024146.2PF00141.18peroxidase972741.10E-39


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.133
SRR1783600control1.831
SRR1783602moderate drought stress4.470
SRR1811619moderate drought stress4.957

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.687
DRR006520Root Summer glycyrrhizin high producing strain2.578
DRR006521Root Winter glycyrrhizin high producing strain1.210
DRR006522Root Winter glycyrrhizin high producing strain1.452
DRR006523Root Summer glycyrrhizin low producing strain2.337
DRR006524Root Summer glycyrrhizin low producing strain2.131
DRR006525Leaf Summer glycyrrhizin high producing strain17.636
DRR006526Leaf Summer glycyrrhizin high producing strain18.990

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.303
SRR2868004Drought Stress(Tissue:root)10.069
SRR2967015Control (Tissue:root)9.876

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.769
SRR9715740Leave13.037
SRR9715741Leave10.777
SRR9715739Root1.724
SRR9715742Root2.127
SRR9715743Root2.398

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.421
SRR8749028MeJA induced 9h9.088
SRR8749029MeJA induced 9h5.606
SRR8749030Uninduced7.155
SRR8749031Uninduced5.558
SRR8749032Uninduced5.383

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.820
SRR8400027Control-Root10.766

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved