Gene detail information of Glyur000785s00024165.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11270.1 | 1.00E-58 | overexpressor of cationic peroxidase 3 |
| NR | XP_003523691.1 | 1.71E-136 | PREDICTED: uncharacterized protein LOC100784216 [Glycine max] |
| trEMBL | tr|I1JUE1|I1JUE1_SOYBN | 6.00E-137 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G07230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00785 | 104414 | 108066 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000785s00024165.1 | PF00046.24 | Homeobox | 250 | 298 | 2.40E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.248 |
| SRR1783600 | control | 22.152 |
| SRR1783602 | moderate drought stress | 24.514 |
| SRR1811619 | moderate drought stress | 24.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.373 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.099 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.469 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.135 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.513 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.240 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.182 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.470 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.663 |
| SRR2967015 | Control (Tissue:root) | 9.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 15.347 |
| SRR9715740 | Leave | 24.126 |
| SRR9715741 | Leave | 13.306 |
| SRR9715739 | Root | 4.227 |
| SRR9715742 | Root | 7.995 |
| SRR9715743 | Root | 6.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.108 |
| SRR8749028 | MeJA induced 9h | 13.004 |
| SRR8749029 | MeJA induced 9h | 12.099 |
| SRR8749030 | Uninduced | 6.536 |
| SRR8749031 | Uninduced | 7.054 |
| SRR8749032 | Uninduced | 5.801 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 13.904 |
| SRR8400027 | Control-Root | 14.906 |