Gene detail information of Glyur000786s00023863.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G01690.10ARM repeat superfamily protein
NRXP_004498253.10PREDICTED: protein VAC14 homolog [Cicer arietinum]
Swissprottr|Q9ZU97|VAC14_ARATH0Protein VAC14 homolog
trEMBLtr|V7C547|V7C547_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW25244.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007868656796326-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0043550  regulation of lipid kinase activity


cellular_component

GO:0070772  PAS complex


molecular_function

GO:0005488  binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000786s00023863.2PF12755.2Vac14_Fab1_bd651613.70E-41
Glyur000786s00023863.2PF11916.3Vac14_Fig4_bd4526348.80E-72


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.118
SRR1783600control13.192
SRR1783602moderate drought stress11.621
SRR1811619moderate drought stress11.407

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.122
DRR006520Root Summer glycyrrhizin high producing strain17.983
DRR006521Root Winter glycyrrhizin high producing strain9.995
DRR006522Root Winter glycyrrhizin high producing strain9.729
DRR006523Root Summer glycyrrhizin low producing strain14.117
DRR006524Root Summer glycyrrhizin low producing strain14.189
DRR006525Leaf Summer glycyrrhizin high producing strain9.854
DRR006526Leaf Summer glycyrrhizin high producing strain9.861

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.582
SRR2868004Drought Stress(Tissue:root)25.312
SRR2967015Control (Tissue:root)24.427

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.402
SRR9715740Leave18.002
SRR9715741Leave22.161
SRR9715739Root15.240
SRR9715742Root16.934
SRR9715743Root16.825

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.248
SRR8749028MeJA induced 9h8.705
SRR8749029MeJA induced 9h5.168
SRR8749030Uninduced4.402
SRR8749031Uninduced2.439
SRR8749032Uninduced2.144

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.564
SRR8400027Control-Root22.861

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved