Gene detail information of Glyur000789s00034748.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G38470.19.00E-68ACT-like protein tyrosine kinase family protein
NRAES59821.29.11E-116ACT-like tyrosine kinase family protein [Medicago truncatula]
COGYP_002882224.14.00E-13serine/threonine protein kinase [Beutenbergia cavernae DSM 12333]
Swissprottr|Q2MHE4|HT1_ARATH1.00E-17Serine/threonine-protein kinase HT1
trEMBLtr|G7I8D9|G7I8D9_MEDTR3.00E-116ACT-like tyrosine kinase family protein {ECO:0000313|EMBL:AES59821.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007898834093468-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0008152  metabolic process


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016597  amino acid binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000789s00034748.1PF01842.20ACT2499.20E-05
Glyur000789s00034748.1PF00069.20Pkinase1762399.90E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.371
SRR1783600control1.120
SRR1783602moderate drought stress0.979
SRR1811619moderate drought stress0.811

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.352
DRR006520Root Summer glycyrrhizin high producing strain1.088
DRR006521Root Winter glycyrrhizin high producing strain0.668
DRR006522Root Winter glycyrrhizin high producing strain0.595
DRR006523Root Summer glycyrrhizin low producing strain1.012
DRR006524Root Summer glycyrrhizin low producing strain1.308
DRR006525Leaf Summer glycyrrhizin high producing strain0.000
DRR006526Leaf Summer glycyrrhizin high producing strain0.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.452
SRR2868004Drought Stress(Tissue:root)2.216
SRR2967015Control (Tissue:root)0.894

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.134
SRR9715740Leave0.103
SRR9715741Leave0.588
SRR9715739Root0.000
SRR9715742Root0.196
SRR9715743Root0.276

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.360
SRR8749028MeJA induced 9h2.479
SRR8749029MeJA induced 9h2.498
SRR8749030Uninduced0.844
SRR8749031Uninduced0.920
SRR8749032Uninduced0.898

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.712
SRR8400027Control-Root1.563

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved