Gene detail information of Glyur000790s00021803.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G16110.12.00E-96response regulator 2
NRXP_004498241.10PREDICTED: two-component response regulator ARR2-like isoform X1 [Cicer arietinum]
COGYP_003290083.12.00E-14Fis family two component sigma-54 specific transcriptional regulator [Rhodothermus marinus DSM 4252]
Swissprottr|Q9ZWJ9|ARR2_ARATH1.00E-111Two-component response regulator ARR2
trEMBLtr|K7K757|K7K757_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G09451.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007906214368950+


Gene family

Gene familysubfamily
Transcription Factors FamilyARR-B


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system


molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000790s00021803.1PF00072.19Response_reg421503.00E-20
Glyur000790s00021803.1PF00249.26Myb_DNA-binding2282802.60E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.140
SRR1783600control18.181
SRR1783602moderate drought stress22.237
SRR1811619moderate drought stress22.024

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.341
DRR006520Root Summer glycyrrhizin high producing strain16.921
DRR006521Root Winter glycyrrhizin high producing strain4.033
DRR006522Root Winter glycyrrhizin high producing strain4.022
DRR006523Root Summer glycyrrhizin low producing strain21.996
DRR006524Root Summer glycyrrhizin low producing strain21.905
DRR006525Leaf Summer glycyrrhizin high producing strain15.158
DRR006526Leaf Summer glycyrrhizin high producing strain15.089

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.982
SRR2868004Drought Stress(Tissue:root)16.060
SRR2967015Control (Tissue:root)24.417

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.028
SRR9715740Leave26.340
SRR9715741Leave26.172
SRR9715739Root9.433
SRR9715742Root21.502
SRR9715743Root20.855

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.527
SRR8749028MeJA induced 9h11.360
SRR8749029MeJA induced 9h7.198
SRR8749030Uninduced3.435
SRR8749031Uninduced1.565
SRR8749032Uninduced2.084

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.197
SRR8400027Control-Root21.806

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved