Gene detail information of Glyur000791s00032232.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G24270.46.00E-49aldehyde dehydrogenase 11A3
NRXP_003610351.16.26E-64NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [Medicago truncatula]
COGNP_350239.12.00E-27NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [Clostridium acetobutylicum ATCC 824]
Swissprottr|P81406|GAPN_PEA2.00E-64NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
trEMBLtr|G7JGT1|G7JGT1_MEDTR3.00E-62NADP-dependent glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:AES92549.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007919566498743+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00131gapN EC:1.2.1.9 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000791s00032232.1PF00171.17Aldedh39891.30E-07
Glyur000791s00032232.1PF00171.17Aldedh1001563.00E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.780
SRR1783600control26.099
SRR1783602moderate drought stress67.930
SRR1811619moderate drought stress64.405

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.040
DRR006520Root Summer glycyrrhizin high producing strain25.721
DRR006521Root Winter glycyrrhizin high producing strain42.803
DRR006522Root Winter glycyrrhizin high producing strain41.261
DRR006523Root Summer glycyrrhizin low producing strain18.880
DRR006524Root Summer glycyrrhizin low producing strain19.597
DRR006525Leaf Summer glycyrrhizin high producing strain20.446
DRR006526Leaf Summer glycyrrhizin high producing strain19.268

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.230
SRR2868004Drought Stress(Tissue:root)61.301
SRR2967015Control (Tissue:root)57.992

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.052
SRR9715740Leave15.372
SRR9715741Leave11.388
SRR9715739Root1.708
SRR9715742Root2.606
SRR9715743Root2.630

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h108.604
SRR8749028MeJA induced 9h152.217
SRR8749029MeJA induced 9h129.688
SRR8749030Uninduced398.988
SRR8749031Uninduced378.475
SRR8749032Uninduced335.405

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root47.946
SRR8400027Control-Root38.220

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved