Gene detail information of Glyur000793s00026494.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42200.1 | 2.00E-29 | squamosa promoter binding protein-like 9 |
| NR | XP_003517942.1 | 2.47E-107 | PREDICTED: squamosa promoter-binding-like protein 7-like isoform X1 [Glycine max] |
| Swissprot | tr|Q7XT42|SPL7_ORYSJ | 2.00E-47 | Squamosa promoter-binding-like protein 7 |
| trEMBL | tr|K7K2H7|K7K2H7_SOYBN | 9.00E-108 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G15134.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00793 | 4664 | 7993 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | SBP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000793s00026494.1 | PF03110.9 | SBP | 142 | 219 | 2.10E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.647 |
| SRR1783600 | control | 0.680 |
| SRR1783602 | moderate drought stress | 0.403 |
| SRR1811619 | moderate drought stress | 0.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.198 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.088 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.026 |
| SRR2967015 | Control (Tissue:root) | 0.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.142 |
| SRR9715740 | Leave | 0.067 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.571 |
| SRR9715742 | Root | 0.471 |
| SRR9715743 | Root | 0.456 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.002 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.674 |
| SRR8400027 | Control-Root | 0.337 |