Gene detail information of Glyur000793s00026503.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G14840.25.00E-154Leucine-rich repeat transmembrane protein kinase
NRKEH19463.10LRR receptor-like kinase [Medicago truncatula]
COGYP_004775215.11.00E-22RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGN2|Y3148_ARATH0Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 (Precursor)
trEMBLtr|A0A072TRL0|A0A072TRL0_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:KEH19463.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007936787178846+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.1
Carbohydrate-Active enzymes FamilyCBM57


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000793s00026503.1PF11721.3Malectin3275111.20E-53
Glyur000793s00026503.1PF00069.20Pkinase6156795.40E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.496
SRR1783600control9.738
SRR1783602moderate drought stress12.607
SRR1811619moderate drought stress12.554

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.621
DRR006520Root Summer glycyrrhizin high producing strain10.623
DRR006521Root Winter glycyrrhizin high producing strain51.879
DRR006522Root Winter glycyrrhizin high producing strain52.563
DRR006523Root Summer glycyrrhizin low producing strain29.859
DRR006524Root Summer glycyrrhizin low producing strain29.650
DRR006525Leaf Summer glycyrrhizin high producing strain7.131
DRR006526Leaf Summer glycyrrhizin high producing strain6.725

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.222
SRR2868004Drought Stress(Tissue:root)10.251
SRR2967015Control (Tissue:root)11.096

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.011
SRR9715740Leave7.376
SRR9715741Leave11.177
SRR9715739Root1.815
SRR9715742Root14.324
SRR9715743Root12.236

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h45.529
SRR8749028MeJA induced 9h142.010
SRR8749029MeJA induced 9h84.210
SRR8749030Uninduced148.876
SRR8749031Uninduced171.323
SRR8749032Uninduced99.350

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.327
SRR8400027Control-Root21.358

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved